Acknowledgements and Citations

Please cite the following papers if using GLMPrior:

• Bouckaert, et al. "BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis", PLoS computational biology, 15(4), e1006650 (2019), doi:10.1371/journal.pcbi.1006650.

  TODO GLM

Please also cite the following papers if using GLMPrior together with BDMM-Prime:

• Vaughan and Stadler, "Bayesian phylodynamic inference of multi-type population trajectories using genomic data", MBE, 42(6):msaf130 (2025), doi:10.1093/molbev/msaf130
• Scire et al., "Robust Phylodynamic Analysis of Genetic Sequencing Data from Structured Populations", Viruses, 14(8):1648 (2022), doi:10.3390/v14081648.
• Kühnert, et al., "Phylodynamics with Migration: A ComputationalFramework to Quantify Population Structure from Genomic Data", MBE, 33(8):2102-2116 (2016), doi:10.1093/molbev/msw064.

License

GLMPrior is free software. It is distributed under the terms of version 3 of the GNU General Public License. A copy of this license should be found in the file COPYING located in the root directory of this repository. If this file is absent for some reason, it can also be retrieved from https://www.gnu.org/licenses.